Dear MedBioNode users,
I’ve rebooted the login node and used this opportunity to also upgrade rstudio server to the latest version.
Regards,
Slave
--
Slave Trajanoski, Phd
Senior Scientist Bioinformatics
CF Computational Bioanalytics, Center for medical research
Medical University Graz
Neue Stiftingtalstraße 6-West, Turm/Stiege:P, 4.Stock
Tel. +43 316 385 73024
E-Mail: slave.trajanoski(a)medunigraz.at<mailto:slave.trajanoski@medunigraz.at>
Dear MedBioNode users,
login node sx036 lost connection to the mount point "/home/cluster" and therefore needs to be restarted. We plan to make the restart over the weekend, so please take this in consideration and expect short downtime. The reboot will also affect all RStudio Server users, since it is running on this machine. Running SLURM jobs will not be affected.
Thanks for the understanding.
Regards,
Slave
--
Slave Trajanoski, Phd
Senior Scientist Bioinformatics
CF Computational Bioanalytics, Center for medical research
Medical University Graz
Neue Stiftingtalstraße 6-West, Turm/Stiege:P, 4.Stock
8010 Graz
Tel. +43 316 385 73024
E-Mail: slave.trajanoski(a)medunigraz.at<mailto:slave.trajanoski@medunigraz.at>
Dear MedBioNode user,
it is planned in the next time to expand our HPC infrastructure and therewith to provide more CPU and GPU performance for jobs execution. To proper plan cluster growth it is very critical to evaluate your needs, as well as expected amount of future CPU based or GPU based data analysis tasks.
Therefore provide us information about bottlenecks that you currently experience in using MedBioNode. Also it will be very helpful if you can already estimate calculation capacity separately CPU or GPU for your data analysis for this year. If you have some questions, or you're uncertain how to provide this information contact me to assist you.
Thanks very much in advance for your cooperation.
Best regards,
Slave
--
Slave Trajanoski, Phd
Senior Scientist Bioinformatics
CF Computational Bioanalytics, Center for medical research
Medical University Graz
Neue Stiftingtalstraße 6-West, Turm/Stiege:P, 4.Stock
8010 Graz
Tel. +43 316 385 73024
E-Mail: slave.trajanoski(a)medunigraz.at<mailto:slave.trajanoski@medunigraz.at>
Dear MedBioNode users,
I'd like to bring to your attention that we have Singularity version 4.0.3 on our cluster.
Best regards,
Slave
--
Slave Trajanoski, Phd
Senior Scientist Bioinformatics
CF Computational Bioanalytics, Center for medical research
Medical University Graz
Neue Stiftingtalstraße 6-West, Turm/Stiege:P, 4.Stock
8010 Graz
Tel. +43 316 385 73024
E-Mail: slave.trajanoski(a)medunigraz.at<mailto:slave.trajanoski@medunigraz.at>
